小枫炮炮的博客分享 http://blog.sciencenet.cn/u/maplesword 呼吸着自由的空气,在计算生物学的海洋里畅泳

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[Paper Excerpt]Genome-wide analysis of allelic expression imbalance in human pri
2010-8-28 23:58
Highlight: This is an easy-understanding paper, describing a detailed process for analyzing allele-specific expression with RNA-Seq data. It is very useful and it is possible for us to follow its steps to achieve the preliminary results. Outline: I. Expectation: a large fraction of the loci (SNPs) ...
个人分类: 未分类|4930 次阅读|没有评论
[Paper Excerpt]Transcriptome genetics using second generation sequencing in a Ca
2010-8-28 23:58
Outline: I. Data 1) Data source: the authors sequenced the mRNA fraction of the transcriptome of lymphoblastoid cell lines from 60 CEU individuals using 37-bp paired-end Illumina sequencing. Each individual yielded 16.9+-5.9 million reads that mapped to the NCBI36 assembly of the human genome using ...
个人分类: 未分类|3899 次阅读|没有评论
[Paper Excerpt]Genome-wide allele-specific analysis: insights into regulatory va
2010-8-28 23:56
Summary in one sentence: It is a review generally reviewing the methods for genome-wide allele-specific analysis and the mechanisms causing the allelic biases. Outlines: 1. eQTL is what researchers are focusing on to find out human genetic variation that affects gene expression. However, direct ass ...
个人分类: 未分类|4083 次阅读|没有评论
以后要好好用这个博客
2010-7-4 20:28
难得开了个博客,就好好珍惜下,以后有机会就多写点东西吧! 既然是科学网的博客,学术成分也是应该多些的;然后再加点游记图片好了哈。 正在准备很可能是这辈子最后一个专业课考试,等考完了就开始写吧!
个人分类: 未分类|2506 次阅读|1 个评论

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